I have tried to generate the window with the ratio based window creater and tried another climate file. I have also tried the runEPSimulation-component.
As @chris has kindly answered to the same issue in this post, your windows actually are created and do participate in the calculations, however, they do not appear in the final IDF file.
I just wanted to say that I am very sorry for not seeing this conversation earlier and @Mesrop is correct that the answer is in the thread he linked to. Thank you for posting it @Mesrop !